Male Reproductive Anatomy: Self-Exam, Infertility, Vasectomy, and Circumcision
Comprehensive guide to male reproductive health including testicular self-examination, male infertility evaluation (semen analysis, causes), vasectomy procedure and reversal, circumcision (benefits and risks), and common anatomical conditions.
This content is for informational purposes only. Always consult a healthcare professional.
Introduction
The male reproductive system consists of external and internal organs responsible for hormone production, spermatogenesis, and delivery of sperm. Understanding normal anatomy, performing regular self-examination, and recognizing abnormalities are essential for early detection of conditions including testicular cancer, infertility, and sexual dysfunction.
Anatomy Overview
Organ
Function
Clinical Significance
Testes
Sperm production (spermatogenesis) and testosterone production
Site of testicular cancer; torsion; varicocele
Epididymis
Storage and maturation of sperm
Epididymitis (infection/inflammation)
Vas deferens
Transport of sperm from epididymis to ejaculatory duct
Vasectomy (cut/occluded here)
Seminal vesicles
Produce 60-70% of seminal fluid (fructose, prostaglandins)
Causes of low semen volume
Prostate gland
Produces 20-30% of seminal fluid (PSA, acid phosphatase, zinc)
BPH, prostatitis, prostate cancer
Bulbourethral glands (Cowper)
Pre-ejaculate fluid (lubrication, neutralizes urethral acidity)
Usually asymptomatic
Penis
Organ for urine elimination and sperm delivery
Peyronie disease, erectile dysfunction, urethral stricture
Scrotum
Holds testes, regulates temperature (contraction/relaxation)
Scrotal masses, infections
Testicular Self-Examination (TSE)
Technique
Step
Instruction
1
Perform monthly, ideally after warm bath or shower (scrotal skin relaxed)
2
Stand in front of mirror; examine scrotum for swelling, asymmetry
3
Support scrotum in palm of hand
4
Roll each testicle gently between thumb and fingers
5
Feel for the epididymis (soft, cord-like structure on top and behind each testicle)
6
Palpate the spermatic cord (vas deferens) above testicle
7
Note normal size, shape, consistency (firm but not hard; smooth, oval)
8
Report any changes to healthcare provider
What to Look For
Finding
Significance
Painless lump or enlargement
Possible testicular cancer (most common sign)
Dull ache or heavy sensation
Possible testicular cancer
Sharp pain
Possible torsion, trauma, infection
Scrotal swelling
Possible hydrocele, varicocele, hernia
Tenderness in epididymis
Epididymitis
“Bag of worms” sensation above testicle
Varicocele
Absent testicle
Cryptorchidism (undescended); prior orchiectomy
Male Infertility
Incidence and Causes
Category
Percentage
Male factor only
20-30%
Male and female combined
20-30%
Female factor only
30-40%
Unexplained
10-20%
Causes of Male Infertility
Category
Conditions
Percentage of Male Infertility
Idiopathic
No identifiable cause despite complete evaluation
30-40%
Varicocele
Dilated scrotal veins causing increased testicular temperature and oxidative stress
35-40%
Hormonal (hypogonadotropic hypogonadism)
Kallmann syndrome, pituitary tumor, anabolic steroid use
2-5%
Post-testicular obstruction
Congenital absence of vas deferens (CF mutation), vasectomy, infection
10-20%
Testicular failure
Klinefelter (XXY), cryptorchidism, orchitis (mumps), chemotherapy, radiation
10-15%
Genetic
Klinefelter, Y-microdeletion, CF (CFTR mutation), chromosomal translocations
5-10%
Ejaculatory dysfunction
Retrograde ejaculation (surgery, diabetes, spinal cord injury), anejaculation
2-5%
Autoimmune
Anti-sperm antibodies
5-10%
Infection
Prior epididymitis, orchitis, prostatitis, STIs
5-10%
Lifestyle
Smoking, alcohol, obesity, heat exposure, stress, medications
Variable
Semen Analysis (WHO 5th Edition, 2010)
Parameter
Lower Reference Limit
Semen volume
1.5 mL
pH
7.2-8.0
Sperm concentration
15 million/mL
Total sperm count
39 million per ejaculate
Total motility (PR + NP)
40%
Progressive motility (PR)
32%
Normal morphology (strict Kruger)
4%
Vitality (live sperm)
58%
Leukocytes
<1.0 million/mL
Immunobead test (anti-sperm antibodies)
<50% coated
Semen fructose
Present (normal seminal vesicle function)
Infertility Evaluation (Male)
Test
When Indicated
Clinical Utility
History and physical
All
Sexual history, prior fertility, medical/surgical history, lifestyle, varicocele, testicular atrophy, secondary sexual characteristics
Semen analysis (x2)
All (first-line)
Confirms abnormality; 2-3 samples over weeks
Hormonal evaluation
Abnormal semen analysis
FSH, LH, total/free testosterone, prolactin, estradiol
Post-ejaculate urinalysis
Low volume or suspected retrograde ejaculation
Detects sperm in urine
Scrotal ultrasound
Abnormal physical exam
Confirm varicocele, hydrocele, evaluate for testicular mass
Transrectal ultrasound
Suspected obstruction (low volume, normal size, no CF)
Evaluate ejaculatory ducts, seminal vesicles
Genetic testing
Azoospermia, severe oligospermia, CF suspicion
Karyotype, Y-microdeletion, CFTR mutation
Testicular biopsy
Azoospermia with normal FSH and testicular size
Distinguish obstruction from spermatogenic failure
Anti-sperm antibody testing
Abnormal sperm motility or agglutination
Immunobead or MAR test
Treatment
Cause
Treatment
Varicocele
Varicocelectomy (microsurgical) improves semen parameters in 60-80%; natural conception rates improved
Hypogonadotropic hypogonadism
hCG + FSH (gonadotropin therapy); sperm production in 6-18 months
Obstruction
Vasovasostomy (post-vasectomy); transurethral resection of ejaculatory ducts
Idiopathic (no cause found)
Lifestyle modification, antioxidants (vitamin C, E, CoQ10, zinc, selenium) limited evidence; IUI or IVF/ICSI
Severe male factor (low count/motility)
ICSI-IVF (intracytoplasmic sperm injection)
Azoospermia (no sperm in ejaculate)
TESE (testicular sperm extraction) + ICSI; micro-TESE best success
Retrograde ejaculation
Alpha-adrenergic agonists (pseudoephedrine, imipramine); sperm retrieval from urine
Genetic causes
ICSI + consider PGT for genetic testing of embryos
Immunologic
IUI (sperm washed to remove antibodies)
Vasectomy
Procedure Details
Aspect
Description
Anesthesia
Local (lidocaine, no sedation typically)
Incision
Small scrotal incision(s) or no-scalpel technique
Procedure
Vas deferens isolated, divided, and occluded (ligation, cautery, fascial interposition, or clips)
Duration
15-30 minutes
Recovery
1-2 days; scrotal support, ice, limited activity for 48 hours
Time to azoospermia
3 months or 20 ejaculations
Confirmation
Semen analysis showing no sperm (one or two negative samples)
Efficacy
>99.9%
Failure rate
1 in 2,000-4,000 (recanalization most common cause)
No-Scalpel Vasectomy
Feature
Traditional
No-Scalpel
Instrument
Scalpel incision
Ringed clamp + puncture
Incision size
1-2 cm (may need suture)
2-4 mm (usually no suture)
Bleeding
More
Minimal
Hematoma risk
2-5%
<1%
Infection risk
Slightly higher
Lower
Recovery
Similar
Similar
Efficacy
Equal
Equal
Side Effects and Complications
Complication
Frequency
Management
Hematoma
1-5%
Scrotal support, ice, NSAIDs; surgical evacuation if large
Infection
1-3%
Oral antibiotics
Granuloma (sperm leak)
10-30% (often asymptomatic)
NSAIDs; may resolve spontaneously; excision rarely needed
Chronic testicular pain (congestive epididymitis)
1-2% (significant)
NSAIDs, scrotal support; vasovasostomy if severe
Failure
1 in 2,000-4,000
Repeat vasectomy or other contraception
Regret
2-6%
Vasectomy reversal or sperm retrieval
Cancer/autoimmune
No increased risk
Reassurance
Vasectomy Reversal (Vasovasostomy)
Aspect
Details
Indications
Desire for biological children after vasectomy
Procedure
Microsurgical reconnection of vas deferens under general or regional anesthesia
Duration
2-5 hours
Tuition
30-90% patency (sperm); 30-80% pregnancy
Time since vasectomy
<3 years: 90% patency, 60-80% pregnancy; >15 years: 30-50% patency
Factors
Length of vas resected, presence of sperm granuloma, surgical technique
Alternatives
Sperm retrieval + ICSI-IVF (typically less successful per cycle but avoids surgery)
Circumcision
Aspect
Details
Definition
Surgical removal of the foreskin (prepuce) covering the glans penis
Prevalence
60-65% of male newborns in US; varies globally (higher in US, Middle East; lower in Europe, Asia)
Timing
Newborn (most common), childhood, or adulthood
Procedure for newborn
Dorsal penile block or ring block (local anesthesia); Gomco clamp, Plastibell, or Mogen clamp
Healing
5-10 days; petroleum jelly for first few days; normal bathing allowed
Medical Benefits vs Risks
Aspect
Benefit
Risk
UTI reduction
10x reduction in uncircumcised infants (1% vs 0.1%)
Bleeding (0.1-1%)
Penile cancer
Virtually eliminated in circumcised men (0.1% vs 0.5-1% lifetime)
Infection (0.1-0.5%)
HIV transmission (heterosexual)
50-60% reduction (African RCTs)
Removal of healthy tissue
STI transmission (HPV, HSV)
30-50% reduction in HPV, HSV-2
Anesthetic complications (rare)
Phimosis/paraphimosis
Eliminates these conditions
Meatal stenosis (5-10% of circumcised males - most common late complication)
Balanitis (foreskin infection)
Reduced
Poor cosmetic outcome (variation)
Cervical cancer risk in female partners
Reduced (HPV-related)
Personal preference/religious concerns
American Academy of Pediatrics (2012) Position
Statement
Detail
Health benefits
Benefits of newborn circumcision outweigh risks
Benefits include
Reduced UTI (10x), reduced penile cancer (lifetime), reduced HIV (60% in African trials), reduced HPV/HSV
Recommendation
Not universal; parents should make informed decision based on medical benefits, risks, and cultural/religious/personal preferences
Insurance coverage
Varies by state; Medicaid coverage varies
Pain management
Local anesthesia is safe and effective; should always be used
Phimosis and Paraphimosis
Condition
Phimosis
Paraphimosis
Definition
Inability to retract foreskin over glans
Retracted foreskin cannot be returned to normal position
Age
Normal in children (physiologic); resolves by age 3-5 in 90%
Any age
Cause
Physiologic adhesion, scarring (balanitis xerotica obliterans, lichen sclerosus)
Retracted foreskin left in place (sexual activity, catheter placement)
Symptoms
Difficulty with hygiene, ballooning during urination, pain with erection
Painful, swollen glans, can progress to ischemia
Treatment (physiologic)
Reassurance (up to age 3-5); gentle retraction with bathing
Manual reduction (compress glans, push proximally)
Treatment (pathologic)
Topical steroid (betamethasone 0.05%) 2x daily x4-8 weeks (70-80% success); circumcision if fails
Ice/cold compress; osmotic reduction (sugar, wrapped); dorsal slit if reduction fails
Emergency
N/A
Yes (if cannot reduce, may need dorsal slit or emergent circumcision)
Penile Anatomy Conditions
Condition
Description
Treatment
Peyronie disease
Fibrous plaque in tunica albuginea causing penile curvature with erection
Observation (may resolve in 1 year for mild); collagenase (Xiaflex) injection for curvature >30-90 degrees; surgical plication or grafting
Penile fracture
Rupture of tunica albuginea during erection (trauma, “cracking” sound, sudden detumescence, swelling)
Surgical emergency: immediate repair
Urethral stricture
Narrowing of urethra from scar tissue (infection, trauma, instrumentation)
Urethral dilation, internal urethrotomy, urethroplasty
Hypospadias
Urethral opening on ventral surface of penis
Surgical repair (optimal timing 6-18 months)
Epispadias
Urethral opening on dorsal surface
Surgical repair
Buried penis
Penis hidden by suprapubic fat pad
Weight loss; surgical correction if symptomatic
Testicular torsion
Spermatic cord twists, causing testicular ischemia
Surgical emergency: detorsion + orchiopexy within 4-6 hours